Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
H1fooQ8VIK3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm11764-201ENSMUST00000120221 623 ntBASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm28659-201ENSMUST00000188013 759 ntBASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm5864-201ENSMUST00000202263 970 ntBASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H1fooQ8VIK3 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm45167-201ENSMUST00000208007 322 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm10060-201ENSMUST00000212002 111 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H1fooQ8VIK3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Gm13884-201ENSMUST00000118103 829 ntBASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
H1fooQ8VIK3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms