Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Gm8344-201ENSMUST00000119813 856 ntBASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rab40cQ8VHQ4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rab40cQ8VHQ4 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Gm9013-201ENSMUST00000132939 882 ntBASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Carlr-201ENSMUST00000181515 2574 ntBASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rab40cQ8VHQ4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rab40cQ8VHQ4 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms