Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Trim9Q8C7M3 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim9Q8C7M3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Thap2-203ENSMUST00000218989 527 ntBASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim9Q8C7M3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm17968-201ENSMUST00000194902 784 ntBASIC16.42■□□□□ 0.22
Trim9Q8C7M3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm5364-201ENSMUST00000216789 889 ntBASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trim9Q8C7M3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim9Q8C7M3 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.41■□□□□ 0.22
Trim9Q8C7M3 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms