Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Gm24513-201ENSMUST00000174964 138 ntBASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Depdc1bQ8BH88 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.22■□□□□ 0.19
Depdc1bQ8BH88 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Gm18489-201ENSMUST00000172565 551 ntBASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Mir8117-201ENSMUST00000184773 107 ntBASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Gm27397-201ENSMUST00000184997 107 ntBASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Celf4-206ENSMUST00000224553 1729 ntBASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Depdc1bQ8BH88 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.21■□□□□ 0.18
Depdc1bQ8BH88 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Depdc1bQ8BH88 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC16.21■□□□□ 0.18
Depdc1bQ8BH88 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Depdc1bQ8BH88 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Depdc1bQ8BH88 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Efs-202ENSMUST00000227037 2540 ntBASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Gm43575-201ENSMUST00000196420 516 ntBASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Gm45167-201ENSMUST00000208007 322 ntBASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Depdc1bQ8BH88 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Depdc1bQ8BH88 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms