Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Trim62Q80V85 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim62Q80V85 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim62Q80V85 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim62Q80V85 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.41■□□□□ 0.06
Trim62Q80V85 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Gm11543-201ENSMUST00000120758 370 ntBASIC15.41■□□□□ 0.06
Trim62Q80V85 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim62Q80V85 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim62Q80V85 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim62Q80V85 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.41■□□□□ 0.06
Trim62Q80V85 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
Trim62Q80V85 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim62Q80V85 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.4■□□□□ 0.06
Trim62Q80V85 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.4■□□□□ 0.06
Trim62Q80V85 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Rprl2-201ENSMUST00000157150 290 ntBASIC15.4■□□□□ 0.06
Trim62Q80V85 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.4■□□□□ 0.06
Trim62Q80V85 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.4■□□□□ 0.06
Trim62Q80V85 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.4■□□□□ 0.06
Trim62Q80V85 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.4■□□□□ 0.06
Trim62Q80V85 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim62Q80V85 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.39■□□□□ 0.05
Trim62Q80V85 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.39■□□□□ 0.05
Trim62Q80V85 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trim62Q80V85 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim62Q80V85 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.39■□□□□ 0.05
Trim62Q80V85 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms