Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
KRT28Q7Z3Y7 AC097637.2-201ENST00000624096 1997 ntBASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 HLA-DRB6-201ENST00000411500 1235 ntBASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
KRT28Q7Z3Y7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 AC025678.2-201ENST00000562061 970 ntBASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 STK25P1-201ENST00000585406 838 ntBASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 AC022145.2-201ENST00000598203 171 ntBASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
KRT28Q7Z3Y7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 AL121761.2-201ENST00000598007 1648 ntBASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 STK19B-204ENST00000512515 211 ntBASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.96■■□□□ 1.43
KRT28Q7Z3Y7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
KRT28Q7Z3Y7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC23.95■■□□□ 1.43
KRT28Q7Z3Y7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.95■■□□□ 1.43
KRT28Q7Z3Y7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.43
KRT28Q7Z3Y7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 MIR4745-201ENST00000577608 62 ntBASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 REXO1L3P-201ENST00000622202 1288 ntBASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC23.95■■□□□ 1.42
KRT28Q7Z3Y7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 LINC00982-205ENST00000420957 435 ntBASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 DUT-210ENST00000559935 569 ntTSL 3 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 LINC00628-201ENST00000628516 1289 ntBASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT28Q7Z3Y7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms