Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Pcdh8Q7TSK3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Gm13616-201ENSMUST00000120600 222 ntBASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Pcdh8Q7TSK3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Pcdh8Q7TSK3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Gm43474-201ENSMUST00000196415 774 ntBASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Gm43125-201ENSMUST00000201724 730 ntBASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Pcdh8Q7TSK3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.69□□□□□ -0.06
Pcdh8Q7TSK3 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms