Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Scaf4Q6PFF0 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scaf4Q6PFF0 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Gm8097-201ENSMUST00000117903 829 ntBASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 AA414768-201ENSMUST00000121924 1257 ntBASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Scaf4Q6PFF0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Scaf4Q6PFF0 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms