Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.03■□□□□ 0.16
Pds5aQ6A026 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.03■□□□□ 0.16
Pds5aQ6A026 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pds5aQ6A026 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.02■□□□□ 0.16
Pds5aQ6A026 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Gm13365-201ENSMUST00000121188 973 ntBASIC16.02■□□□□ 0.16
Pds5aQ6A026 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pds5aQ6A026 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pds5aQ6A026 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Gm15483-201ENSMUST00000120338 456 ntBASIC16.01■□□□□ 0.15
Pds5aQ6A026 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.01■□□□□ 0.15
Pds5aQ6A026 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pds5aQ6A026 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pds5aQ6A026 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pds5aQ6A026 Gm6973-201ENSMUST00000117080 721 ntBASIC16■□□□□ 0.15
Pds5aQ6A026 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC16■□□□□ 0.15
Pds5aQ6A026 AC131187.1-201ENSMUST00000224567 809 ntBASIC16■□□□□ 0.15
Pds5aQ6A026 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Pds5aQ6A026 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms