Protein–RNA interactions for Protein: Q5PSV9

Mdc1, Mediator of DNA damage checkpoint protein 1, mousemouse

Predictions only

Length 1,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mdc1Q5PSV9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Gm18624-201ENSMUST00000220966 658 ntBASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Mdc1Q5PSV9 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Mdc1Q5PSV9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mdc1Q5PSV9 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mdc1Q5PSV9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mdc1Q5PSV9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Mdc1Q5PSV9 Gm5421-201ENSMUST00000181698 2354 ntBASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Gm14780-201ENSMUST00000118387 2737 ntBASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Gm45668-201ENSMUST00000211271 493 ntBASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Mdc1Q5PSV9 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gm42901-201ENSMUST00000197735 3171 ntBASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Gm8602-201ENSMUST00000184045 607 ntBASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 AY702102-202ENSMUST00000194651 1173 ntBASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Mdc1Q5PSV9 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Mdc1Q5PSV9 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mdc1Q5PSV9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Mdc1Q5PSV9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms