Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Actl10-202ENSMUST00000226583 1501 ntBASIC12.32□□□□□ -0.44
Trim63Q38HM4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim63Q38HM4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Gm43034-201ENSMUST00000198678 1364 ntBASIC12.31□□□□□ -0.44
Trim63Q38HM4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.31□□□□□ -0.44
Trim63Q38HM4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.31□□□□□ -0.44
Trim63Q38HM4 Gm13509-201ENSMUST00000119733 1308 ntBASIC12.31□□□□□ -0.44
Trim63Q38HM4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim63Q38HM4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm12821-201ENSMUST00000120022 600 ntBASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm18041-201ENSMUST00000218210 618 ntBASIC12.3□□□□□ -0.44
Trim63Q38HM4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim63Q38HM4 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim63Q38HM4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim63Q38HM4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms