Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx6P54823 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx6P54823 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx6P54823 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx6P54823 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx6P54823 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx6P54823 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Prob1-201ENSMUST00000097619 3021 ntBASIC15.11■□□□□ 0.01
Ddx6P54823 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.11■□□□□ 0.01
Ddx6P54823 Gm8749-201ENSMUST00000117737 331 ntBASIC15.11■□□□□ 0.01
Ddx6P54823 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Ddx6P54823 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx6P54823 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx6P54823 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Gm27533-201ENSMUST00000183800 152 ntBASIC15.11■□□□□ 0.01
Ddx6P54823 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Ddx6P54823 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.11■□□□□ 0.01
Ddx6P54823 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.11■□□□□ 0.01
Ddx6P54823 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.11■□□□□ 0.01
Ddx6P54823 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ddx6P54823 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Ddx6P54823 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.11■□□□□ 0.01
Ddx6P54823 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx6P54823 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Ddx6P54823 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx6P54823 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC15.1■□□□□ 0.01
Ddx6P54823 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.1■□□□□ 0.01
Ddx6P54823 Gm2451-201ENSMUST00000199447 999 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Gm44344-201ENSMUST00000200287 129 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Gm10290-201ENSMUST00000200451 999 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Gm9182-201ENSMUST00000217829 639 ntBASIC15.1■□□□□ 0.01
Ddx6P54823 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx6P54823 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.1■□□□□ 0.01
Ddx6P54823 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ddx6P54823 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 Gm24543-201ENSMUST00000103867 82 ntBASIC15.09■□□□□ 0.01
Ddx6P54823 Gm5866-201ENSMUST00000177881 973 ntBASIC15.09■□□□□ 0.01
Ddx6P54823 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.09■□□□□ 0.01
Ddx6P54823 Gm9063-201ENSMUST00000223299 582 ntBASIC15.09■□□□□ 0.01
Ddx6P54823 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.09■□□□□ 0.01
Ddx6P54823 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ddx6P54823 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ddx6P54823 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.09■□□□□ 0.01
Ddx6P54823 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Ddx6P54823 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Ddx6P54823 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ddx6P54823 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms