Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Msh6P54276 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.8■□□□□ 0.6
Msh6P54276 Gm12859-201ENSMUST00000117834 427 ntBASIC18.8■□□□□ 0.6
Msh6P54276 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.8■□□□□ 0.6
Msh6P54276 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.8■□□□□ 0.6
Msh6P54276 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Msh6P54276 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Msh6P54276 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Gm6263-201ENSMUST00000120029 1342 ntBASIC18.79■□□□□ 0.6
Msh6P54276 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 Gm8749-201ENSMUST00000117737 331 ntBASIC18.79■□□□□ 0.6
Msh6P54276 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.79■□□□□ 0.6
Msh6P54276 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.79■□□□□ 0.6
Msh6P54276 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Msh6P54276 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Msh6P54276 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Msh6P54276 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Msh6P54276 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Msh6P54276 Gm14928-201ENSMUST00000120198 477 ntBASIC18.78■□□□□ 0.6
Msh6P54276 Gm5479-201ENSMUST00000160578 435 ntBASIC18.78■□□□□ 0.6
Msh6P54276 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Msh6P54276 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Msh6P54276 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.77■□□□□ 0.6
Msh6P54276 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Trav13-3-201ENSMUST00000117226 336 ntBASIC18.77■□□□□ 0.6
Msh6P54276 Gm28631-201ENSMUST00000190740 334 ntBASIC18.77■□□□□ 0.6
Msh6P54276 Gm18187-201ENSMUST00000196476 984 ntBASIC18.77■□□□□ 0.6
Msh6P54276 Gm6218-201ENSMUST00000219812 628 ntBASIC18.77■□□□□ 0.6
Msh6P54276 Shd-206ENSMUST00000225145 998 ntBASIC18.77■□□□□ 0.6
Msh6P54276 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Msh6P54276 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh6P54276 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Msh6P54276 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Msh6P54276 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Msh6P54276 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Msh6P54276 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.76■□□□□ 0.59
Msh6P54276 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC18.76■□□□□ 0.59
Msh6P54276 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.76■□□□□ 0.59
Msh6P54276 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.76■□□□□ 0.59
Msh6P54276 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Msh6P54276 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Msh6P54276 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Msh6P54276 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Gm22189-201ENSMUST00000103822 86 ntBASIC18.75■□□□□ 0.59
Msh6P54276 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.75■□□□□ 0.59
Msh6P54276 Olfr286-202ENSMUST00000205305 969 ntBASIC18.75■□□□□ 0.59
Msh6P54276 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Msh6P54276 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Msh6P54276 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms