Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Gm8318-201ENSMUST00000182954 872 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.38□□□□□ -0.11
Lbx1P52955 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Lbx1P52955 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.38□□□□□ -0.11
Lbx1P52955 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Lbx1P52955 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Lbx1P52955 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Lbx1P52955 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Lbx1P52955 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.37□□□□□ -0.11
Lbx1P52955 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.37□□□□□ -0.11
Lbx1P52955 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.37□□□□□ -0.11
Lbx1P52955 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lbx1P52955 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lbx1P52955 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Lbx1P52955 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lbx1P52955 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Gm38266-201ENSMUST00000194931 421 ntBASIC14.37□□□□□ -0.11
Lbx1P52955 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Gm7783-201ENSMUST00000204795 781 ntBASIC14.37□□□□□ -0.11
Lbx1P52955 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Lbx1P52955 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.37□□□□□ -0.11
Lbx1P52955 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Lbx1P52955 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.36□□□□□ -0.11
Lbx1P52955 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lbx1P52955 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Lbx1P52955 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
Lbx1P52955 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.36□□□□□ -0.11
Lbx1P52955 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
Lbx1P52955 Gm9182-201ENSMUST00000217829 639 ntBASIC14.36□□□□□ -0.11
Lbx1P52955 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lbx1P52955 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lbx1P52955 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.35□□□□□ -0.11
Lbx1P52955 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lbx1P52955 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lbx1P52955 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms