Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.3□□□□□ -0.12
Sox18P43680 AC154849.3-201ENSMUST00000223733 1660 ntBASIC14.3□□□□□ -0.12
Sox18P43680 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sox18P43680 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox18P43680 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Sox18P43680 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Sox18P43680 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox18P43680 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox18P43680 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox18P43680 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.29□□□□□ -0.12
Sox18P43680 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.29□□□□□ -0.12
Sox18P43680 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox18P43680 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.29□□□□□ -0.12
Sox18P43680 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Sox18P43680 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Sox18P43680 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Sox18P43680 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.29□□□□□ -0.12
Sox18P43680 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Sox18P43680 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sox18P43680 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox18P43680 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Gm10499-201ENSMUST00000174094 934 ntBASIC14.28□□□□□ -0.12
Sox18P43680 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.28□□□□□ -0.12
Sox18P43680 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sox18P43680 Gm18018-201ENSMUST00000198273 408 ntBASIC14.28□□□□□ -0.12
Sox18P43680 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.28□□□□□ -0.12
Sox18P43680 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Sox18P43680 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.28□□□□□ -0.12
Sox18P43680 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sox18P43680 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Sox18P43680 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Sox18P43680 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sox18P43680 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
Sox18P43680 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sox18P43680 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox18P43680 Gm15824-201ENSMUST00000119516 955 ntBASIC14.27□□□□□ -0.13
Sox18P43680 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Sox18P43680 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Gm16026-204ENSMUST00000162652 683 ntBASIC14.27□□□□□ -0.13
Sox18P43680 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sox18P43680 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.27□□□□□ -0.13
Sox18P43680 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC14.27□□□□□ -0.13
Sox18P43680 Gm17872-201ENSMUST00000222550 532 ntBASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms