Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox5P35710 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox5P35710 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC16.3■□□□□ 0.2
Sox5P35710 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Sox5P35710 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox5P35710 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox5P35710 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Sox5P35710 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sox5P35710 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.29■□□□□ 0.2
Sox5P35710 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Gm14859-201ENSMUST00000117752 357 ntBASIC16.29■□□□□ 0.2
Sox5P35710 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.29■□□□□ 0.2
Sox5P35710 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.29■□□□□ 0.2
Sox5P35710 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.29■□□□□ 0.2
Sox5P35710 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Sox5P35710 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sox5P35710 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sox5P35710 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sox5P35710 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.28■□□□□ 0.2
Sox5P35710 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.28■□□□□ 0.2
Sox5P35710 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Sox5P35710 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sox5P35710 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Gm13418-201ENSMUST00000119097 944 ntBASIC16.27■□□□□ 0.2
Sox5P35710 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.27■□□□□ 0.2
Sox5P35710 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Sox5P35710 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sox5P35710 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox5P35710 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox5P35710 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox5P35710 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Sox5P35710 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.27■□□□□ 0.19
Sox5P35710 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sox5P35710 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sox5P35710 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox5P35710 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox5P35710 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sox5P35710 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.26■□□□□ 0.19
Sox5P35710 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox5P35710 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox5P35710 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms