Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.66□□□□□ -0.22
Hmgn1P18608 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hmgn1P18608 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.66□□□□□ -0.22
Hmgn1P18608 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Hmgn1P18608 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Hmgn1P18608 Gm10499-201ENSMUST00000174094 934 ntBASIC13.65□□□□□ -0.22
Hmgn1P18608 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.65□□□□□ -0.22
Hmgn1P18608 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Hmgn1P18608 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.64□□□□□ -0.23
Hmgn1P18608 Gm15372-201ENSMUST00000120729 834 ntBASIC13.64□□□□□ -0.23
Hmgn1P18608 Gm23634-201ENSMUST00000175071 91 ntBASIC13.64□□□□□ -0.23
Hmgn1P18608 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Hmgn1P18608 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Hmgn1P18608 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Hmgn1P18608 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Hmgn1P18608 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Hmgn1P18608 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Hmgn1P18608 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.63□□□□□ -0.23
Hmgn1P18608 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Hmgn1P18608 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms