Protein–RNA interactions for Protein: P13438

Tpbpa, Trophoblast-specific protein alpha, mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TpbpaP13438 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TpbpaP13438 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TpbpaP13438 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TpbpaP13438 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
TpbpaP13438 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TpbpaP13438 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.55□□□□□ -0.24
TpbpaP13438 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.55□□□□□ -0.24
TpbpaP13438 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Gm27867-201ENSMUST00000184778 125 ntBASIC13.55□□□□□ -0.24
TpbpaP13438 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.55□□□□□ -0.24
TpbpaP13438 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TpbpaP13438 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TpbpaP13438 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TpbpaP13438 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TpbpaP13438 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.55□□□□□ -0.24
TpbpaP13438 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.54□□□□□ -0.24
TpbpaP13438 Gm12497-201ENSMUST00000138778 237 ntBASIC13.54□□□□□ -0.24
TpbpaP13438 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
TpbpaP13438 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
TpbpaP13438 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
TpbpaP13438 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.54□□□□□ -0.24
TpbpaP13438 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.54□□□□□ -0.24
TpbpaP13438 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.54□□□□□ -0.24
TpbpaP13438 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TpbpaP13438 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TpbpaP13438 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TpbpaP13438 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.53□□□□□ -0.24
TpbpaP13438 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TpbpaP13438 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.53□□□□□ -0.24
TpbpaP13438 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.53□□□□□ -0.24
TpbpaP13438 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Gm4459-201ENSMUST00000118750 468 ntBASIC13.53□□□□□ -0.24
TpbpaP13438 Gm13836-201ENSMUST00000121159 501 ntBASIC13.53□□□□□ -0.24
TpbpaP13438 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TpbpaP13438 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TpbpaP13438 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms