Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.32□□□□□ -0.12
Hcn1O88704 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.32□□□□□ -0.12
Hcn1O88704 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.32□□□□□ -0.12
Hcn1O88704 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hcn1O88704 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hcn1O88704 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.31□□□□□ -0.12
Hcn1O88704 Gm11764-201ENSMUST00000120221 623 ntBASIC14.31□□□□□ -0.12
Hcn1O88704 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.31□□□□□ -0.12
Hcn1O88704 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.31□□□□□ -0.12
Hcn1O88704 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.31□□□□□ -0.12
Hcn1O88704 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.31□□□□□ -0.12
Hcn1O88704 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hcn1O88704 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hcn1O88704 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.31□□□□□ -0.12
Hcn1O88704 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hcn1O88704 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hcn1O88704 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm1401-201ENSMUST00000122048 772 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.3□□□□□ -0.12
Hcn1O88704 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm37153-201ENSMUST00000193637 231 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Hcn1O88704 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hcn1O88704 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.3□□□□□ -0.12
Hcn1O88704 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hcn1O88704 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.29□□□□□ -0.12
Hcn1O88704 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Gm43514-201ENSMUST00000198852 424 ntBASIC14.29□□□□□ -0.12
Hcn1O88704 Gm18206-201ENSMUST00000207027 926 ntBASIC14.29□□□□□ -0.12
Hcn1O88704 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.29□□□□□ -0.12
Hcn1O88704 AC122024.2-201ENSMUST00000220086 871 ntBASIC14.29□□□□□ -0.12
Hcn1O88704 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.29□□□□□ -0.12
Hcn1O88704 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Hcn1O88704 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hcn1O88704 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms