Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trbc1A0A0A6YWV4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Mir8117-201ENSMUST00000184773 107 ntBASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm5264-201ENSMUST00000190584 848 ntBASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trbc1A0A0A6YWV4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trbc1A0A0A6YWV4 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm43332-201ENSMUST00000202511 1044 ntBASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 AC174742.1-201ENSMUST00000218272 304 ntBASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trbc1A0A0A6YWV4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.71□□□□□ -0.22
Trbc1A0A0A6YWV4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trbc1A0A0A6YWV4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbc1A0A0A6YWV4 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trbc1A0A0A6YWV4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms