Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm15358-201ENSMUST00000119249 520 ntBASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm12497-201ENSMUST00000138778 237 ntBASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm5587-201ENSMUST00000206270 674 ntBASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav6d-5A0A075B6B9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm11950-201ENSMUST00000121615 838 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Grk6-207ENSMUST00000225925 2769 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav6d-5A0A075B6B9 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Mir3081-201ENSMUST00000175305 84 ntBASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav6d-5A0A075B6B9 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms