Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Gm12728V9GX31 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.02□□□□□ -0.48
Gm12728V9GX31 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Gm12728V9GX31 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Gm4459-201ENSMUST00000118750 468 ntBASIC12.02□□□□□ -0.49
Gm12728V9GX31 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Gm12728V9GX31 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Gm12728V9GX31 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12□□□□□ -0.49
Gm12728V9GX31 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Gm12728V9GX31 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12□□□□□ -0.49
Gm12728V9GX31 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Gm12728V9GX31 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms