Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Gm15372-201ENSMUST00000120729 834 ntBASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Gm44454-201ENSMUST00000198541 138 ntBASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ClpxQ9JHS4 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Gm14722-201ENSMUST00000118943 689 ntBASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.69□□□□□ -0.22
ClpxQ9JHS4 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ClpxQ9JHS4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gm24589-201ENSMUST00000116692 94 ntBASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gm15165-201ENSMUST00000118140 502 ntBASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gm12644-201ENSMUST00000119935 606 ntBASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ClpxQ9JHS4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ClpxQ9JHS4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ClpxQ9JHS4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpxQ9JHS4 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ClpxQ9JHS4 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ClpxQ9JHS4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms