Protein–RNA interactions for Protein: Q9D6T1

Tube1, Tubulin epsilon chain, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tube1Q9D6T1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Tube1Q9D6T1 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tube1Q9D6T1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Gm8318-201ENSMUST00000182954 872 ntBASIC16.6■□□□□ 0.25
Tube1Q9D6T1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tube1Q9D6T1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tube1Q9D6T1 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tube1Q9D6T1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tube1Q9D6T1 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.58■□□□□ 0.25
Tube1Q9D6T1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Tube1Q9D6T1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Gm15427-201ENSMUST00000117288 531 ntBASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Gm12892-201ENSMUST00000117367 1146 ntBASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Gm27301-201ENSMUST00000184012 127 ntBASIC16.58■□□□□ 0.24
Tube1Q9D6T1 Thap2-203ENSMUST00000218989 527 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms