Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm10052-201ENSMUST00000168019 960 ntBASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm7213-201ENSMUST00000215977 950 ntBASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm7370-201ENSMUST00000219471 767 ntBASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Gm7729-201ENSMUST00000050143 801 ntBASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
RTRAFQ9CQE8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Gm16061-201ENSMUST00000122167 857 ntBASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Mir6404-201ENSMUST00000183699 94 ntBASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 AC127302.2-201ENSMUST00000215212 268 ntBASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 AC122351.1-201ENSMUST00000220467 126 ntBASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
RTRAFQ9CQE8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Gm2274-201ENSMUST00000184539 609 ntBASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RTRAFQ9CQE8 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms