Protein–RNA interactions for Protein: Q99MS8

Tpgs1, Tubulin polyglutamylase complex subunit 1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpgs1Q99MS8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpgs1Q99MS8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Gm18737-201ENSMUST00000173594 937 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Gm27397-201ENSMUST00000184997 107 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Gm18057-201ENSMUST00000208220 503 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpgs1Q99MS8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.53■□□□□ 0.08
Tpgs1Q99MS8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.52■□□□□ 0.08
Tpgs1Q99MS8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Tpgs1Q99MS8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms