Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Vps39Q8R5L3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Vps39Q8R5L3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Gm24589-201ENSMUST00000116692 94 ntBASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Gm11764-201ENSMUST00000120221 623 ntBASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Vps39Q8R5L3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm7230-201ENSMUST00000173026 815 ntBASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.96□□□□□ -0.01
Vps39Q8R5L3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Vps39Q8R5L3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Vps39Q8R5L3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms