Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hist3h2bbQ8CGP0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Mir7075-201ENSMUST00000184187 82 ntBASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Hist3h2bbQ8CGP0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hist3h2bbQ8CGP0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hist3h2bbQ8CGP0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Hist3h2bbQ8CGP0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm18958-201ENSMUST00000174258 762 ntBASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm26833-201ENSMUST00000180899 440 ntBASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm15820-201ENSMUST00000201566 728 ntBASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm10138-203ENSMUST00000206952 366 ntBASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Hist3h2bbQ8CGP0 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm8493-201ENSMUST00000196881 489 ntBASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist3h2bbQ8CGP0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist3h2bbQ8CGP0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms