Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHFQ7M4L6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.19■□□□□ 0.18
SHFQ7M4L6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 WWOX-216ENST00000569818 525 ntBASIC16.18■□□□□ 0.18
SHFQ7M4L6 AL023803.3-201ENST00000615559 522 ntBASIC16.18■□□□□ 0.18
SHFQ7M4L6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.18■□□□□ 0.18
SHFQ7M4L6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHFQ7M4L6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.17■□□□□ 0.18
SHFQ7M4L6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 MIR718-201ENST00000390190 70 ntBASIC16.17■□□□□ 0.18
SHFQ7M4L6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 AP003041.3-201ENST00000527151 707 ntBASIC16.17■□□□□ 0.18
SHFQ7M4L6 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
SHFQ7M4L6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHFQ7M4L6 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 AL024508.2-201ENST00000607749 1894 ntBASIC16.16■□□□□ 0.18
SHFQ7M4L6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 HIST1H2APS4-201ENST00000362070 348 ntBASIC16.16■□□□□ 0.18
SHFQ7M4L6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SHFQ7M4L6 BX088651.1-201ENST00000540551 451 ntBASIC16.16■□□□□ 0.18
SHFQ7M4L6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHFQ7M4L6 MIR3180-4-201ENST00000582223 153 ntBASIC16.16■□□□□ 0.18
SHFQ7M4L6 AL139384.1-201ENST00000612143 3047 ntBASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms