Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Chchd1-203ENSMUST00000224633 557 ntBASIC16.06■□□□□ 0.16
Pds5aQ6A026 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.06■□□□□ 0.16
Pds5aQ6A026 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.06■□□□□ 0.16
Pds5aQ6A026 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pds5aQ6A026 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Mir1895-201ENSMUST00000122615 79 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm5867-201ENSMUST00000063197 592 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.05■□□□□ 0.16
Pds5aQ6A026 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pds5aQ6A026 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.04■□□□□ 0.16
Pds5aQ6A026 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Pds5aQ6A026 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.04■□□□□ 0.16
Pds5aQ6A026 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.04■□□□□ 0.16
Pds5aQ6A026 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.04■□□□□ 0.16
Pds5aQ6A026 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pds5aQ6A026 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pds5aQ6A026 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms