Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Clcn1Q64347 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.89■□□□□ 0.61
Clcn1Q64347 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.89■□□□□ 0.61
Clcn1Q64347 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC18.89■□□□□ 0.61
Clcn1Q64347 Gm15487-201ENSMUST00000122373 465 ntBASIC18.89■□□□□ 0.61
Clcn1Q64347 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clcn1Q64347 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clcn1Q64347 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clcn1Q64347 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Clcn1Q64347 Ighv8-7-201ENSMUST00000194349 297 ntBASIC18.88■□□□□ 0.61
Clcn1Q64347 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.88■□□□□ 0.61
Clcn1Q64347 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Clcn1Q64347 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC18.88■□□□□ 0.61
Clcn1Q64347 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clcn1Q64347 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Gm13233-201ENSMUST00000118760 1443 ntBASIC18.87■□□□□ 0.61
Clcn1Q64347 Gm13244-201ENSMUST00000118855 1446 ntBASIC18.87■□□□□ 0.61
Clcn1Q64347 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC18.87■□□□□ 0.61
Clcn1Q64347 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.87■□□□□ 0.61
Clcn1Q64347 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Clcn1Q64347 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Clcn1Q64347 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Clcn1Q64347 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.87■□□□□ 0.61
Clcn1Q64347 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clcn1Q64347 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Clcn1Q64347 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Clcn1Q64347 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.86■□□□□ 0.61
Clcn1Q64347 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Clcn1Q64347 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.86■□□□□ 0.61
Clcn1Q64347 Gm9063-201ENSMUST00000223299 582 ntBASIC18.86■□□□□ 0.61
Clcn1Q64347 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clcn1Q64347 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Clcn1Q64347 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clcn1Q64347 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Gm18737-201ENSMUST00000173594 937 ntBASIC18.85■□□□□ 0.61
Clcn1Q64347 Gm18049-201ENSMUST00000208909 581 ntBASIC18.85■□□□□ 0.61
Clcn1Q64347 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.85■□□□□ 0.61
Clcn1Q64347 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Clcn1Q64347 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Asic1-205ENSMUST00000228185 1818 ntBASIC18.85■□□□□ 0.61
Clcn1Q64347 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.85■□□□□ 0.61
Clcn1Q64347 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clcn1Q64347 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clcn1Q64347 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms