Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vps54Q5SPW0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm26308-201ENSMUST00000157768 69 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm44335-201ENSMUST00000196879 141 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm44297-201ENSMUST00000198304 141 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Gm44346-201ENSMUST00000198851 141 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Vps54Q5SPW0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.92■□□□□ 0.46
Vps54Q5SPW0 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vps54Q5SPW0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Rprl2-201ENSMUST00000157150 290 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Gm18889-201ENSMUST00000174284 929 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.9■□□□□ 0.46
Vps54Q5SPW0 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.9■□□□□ 0.46
Vps54Q5SPW0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms