Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Sf3b6P59708 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3b6P59708 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
Sf3b6P59708 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.28□□□□□ -0.28
Sf3b6P59708 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.28□□□□□ -0.28
Sf3b6P59708 Mir3081-201ENSMUST00000175305 84 ntBASIC13.28□□□□□ -0.28
Sf3b6P59708 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.28□□□□□ -0.28
Sf3b6P59708 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.28□□□□□ -0.28
Sf3b6P59708 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.28□□□□□ -0.28
Sf3b6P59708 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sf3b6P59708 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3b6P59708 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.27□□□□□ -0.28
Sf3b6P59708 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sf3b6P59708 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.27□□□□□ -0.28
Sf3b6P59708 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3b6P59708 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sf3b6P59708 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Gm9103-201ENSMUST00000119371 405 ntBASIC13.27□□□□□ -0.29
Sf3b6P59708 Gm15794-201ENSMUST00000120182 631 ntBASIC13.27□□□□□ -0.29
Sf3b6P59708 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC13.27□□□□□ -0.29
Sf3b6P59708 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sf3b6P59708 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sf3b6P59708 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.27□□□□□ -0.29
Sf3b6P59708 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3b6P59708 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Sf3b6P59708 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.26□□□□□ -0.29
Sf3b6P59708 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3b6P59708 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms