Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Gm4899-201ENSMUST00000178708 719 ntBASIC15.27■□□□□ 0.04
Tubgcp3P58854 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Tubgcp3P58854 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.27■□□□□ 0.04
Tubgcp3P58854 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Tubgcp3P58854 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Tubgcp3P58854 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Tubgcp3P58854 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.25■□□□□ 0.03
Tubgcp3P58854 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Gm13036-201ENSMUST00000117799 748 ntBASIC15.25■□□□□ 0.03
Tubgcp3P58854 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.25■□□□□ 0.03
Tubgcp3P58854 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.25■□□□□ 0.03
Tubgcp3P58854 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.25■□□□□ 0.03
Tubgcp3P58854 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubgcp3P58854 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Tubgcp3P58854 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubgcp3P58854 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Tubgcp3P58854 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Tubgcp3P58854 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms