Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.13□□□□□ -0.47
P06323 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.13□□□□□ -0.47
P06323 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06323 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.13□□□□□ -0.47
P06323 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.12□□□□□ -0.47
P06323 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
P06323 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.12□□□□□ -0.47
P06323 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.12□□□□□ -0.47
P06323 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.12□□□□□ -0.47
P06323 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P06323 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
P06323 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
P06323 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.11□□□□□ -0.47
P06323 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.11□□□□□ -0.47
P06323 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.11□□□□□ -0.47
P06323 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
P06323 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.11□□□□□ -0.47
P06323 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
P06323 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
P06323 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
P06323 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
P06323 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
P06323 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
P06323 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.1□□□□□ -0.47
P06323 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P06323 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P06323 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms