Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC21.65■■□□□ 1.06
GRIN3BO60391 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC21.65■■□□□ 1.06
GRIN3BO60391 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.65■■□□□ 1.06
GRIN3BO60391 TREML5P-201ENST00000421694 576 ntBASIC21.65■■□□□ 1.06
GRIN3BO60391 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.65■■□□□ 1.06
GRIN3BO60391 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.65■■□□□ 1.06
GRIN3BO60391 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.65■■□□□ 1.06
GRIN3BO60391 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIN3BO60391 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.65■■□□□ 1.06
GRIN3BO60391 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
GRIN3BO60391 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
GRIN3BO60391 CU639417.3-201ENST00000624240 1404 ntBASIC21.64■■□□□ 1.06
GRIN3BO60391 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIN3BO60391 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIN3BO60391 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIN3BO60391 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIN3BO60391 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
GRIN3BO60391 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.64■■□□□ 1.05
GRIN3BO60391 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.64■■□□□ 1.05
GRIN3BO60391 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 AL592309.1-201ENST00000443127 649 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 SPDYE11-202ENST00000450699 704 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.64■■□□□ 1.05
GRIN3BO60391 SPDYE9P-201ENST00000570642 692 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 SPDYE10P-202ENST00000612005 668 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 SPDYE8P-202ENST00000612377 668 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 LINC01126-201ENST00000623515 1646 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 AC010460.3-201ENST00000511359 1579 ntBASIC21.64■■□□□ 1.05
GRIN3BO60391 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GRIN3BO60391 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GRIN3BO60391 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
GRIN3BO60391 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.63■■□□□ 1.05
GRIN3BO60391 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.63■■□□□ 1.05
GRIN3BO60391 KRT18P32-201ENST00000424695 1287 ntBASIC21.63■■□□□ 1.05
GRIN3BO60391 AL671277.1-201ENST00000429656 993 ntBASIC21.63■■□□□ 1.05
GRIN3BO60391 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.63■■□□□ 1.05
GRIN3BO60391 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.63■■□□□ 1.05
GRIN3BO60391 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.63■■□□□ 1.05
GRIN3BO60391 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC21.63■■□□□ 1.05
GRIN3BO60391 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
GRIN3BO60391 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.63■■□□□ 1.05
GRIN3BO60391 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GRIN3BO60391 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.62■■□□□ 1.05
GRIN3BO60391 AC092919.2-201ENST00000623631 1645 ntBASIC21.62■■□□□ 1.05
GRIN3BO60391 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.62■■□□□ 1.05
GRIN3BO60391 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.62■■□□□ 1.05
GRIN3BO60391 SLC25A6P5-201ENST00000435663 894 ntBASIC21.62■■□□□ 1.05
GRIN3BO60391 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.62■■□□□ 1.05
GRIN3BO60391 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.62■■□□□ 1.05
GRIN3BO60391 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC21.62■■□□□ 1.05
GRIN3BO60391 AL158211.3-201ENST00000607385 239 ntBASIC21.62■■□□□ 1.05
GRIN3BO60391 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
GRIN3BO60391 AC099778.1-201ENST00000568593 1911 ntBASIC21.62■■□□□ 1.05
GRIN3BO60391 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GRIN3BO60391 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC21.62■■□□□ 1.05
GRIN3BO60391 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.62■■□□□ 1.05
GRIN3BO60391 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.61■■□□□ 1.05
GRIN3BO60391 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GRIN3BO60391 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.61■■□□□ 1.05
GRIN3BO60391 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.61■■□□□ 1.05
GRIN3BO60391 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms