Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav12-1A0N8R1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Gm11780-201ENSMUST00000136880 516 ntBASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav12-1A0N8R1 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Gm18489-201ENSMUST00000172565 551 ntBASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Mir7071-201ENSMUST00000184847 69 ntBASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav12-1A0N8R1 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms