Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Lsm7Q9CQQ8 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Gm43474-201ENSMUST00000196415 774 ntBASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 AC164567.1-201ENSMUST00000219185 960 ntBASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.1■□□□□ 0.01
Lsm7Q9CQQ8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC15.09■□□□□ 0.01
Lsm7Q9CQQ8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.08■□□□□ 0.01
Lsm7Q9CQQ8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Gm15920-201ENSMUST00000118998 402 ntBASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm7Q9CQQ8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms