Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rnf111Q99ML9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rnf111Q99ML9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Gm6296-201ENSMUST00000222599 943 ntBASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf111Q99ML9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf111Q99ML9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Rps4l-201ENSMUST00000071745 943 ntBASIC14.52□□□□□ -0.09
Rnf111Q99ML9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms