Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Gm9103-201ENSMUST00000119371 405 ntBASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhb4Q91XZ6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gm4535-201ENSMUST00000182274 558 ntBASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gm8318-201ENSMUST00000182954 872 ntBASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Birc2-201ENSMUST00000054878 378 ntBASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Gm10355-201ENSMUST00000097146 517 ntBASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.91□□□□□ -0.02
Pcdhb4Q91XZ6 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 AC159301.1-201ENSMUST00000225130 1182 ntBASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Pcdhb4Q91XZ6 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.89□□□□□ -0.03
Pcdhb4Q91XZ6 Gm44357-201ENSMUST00000195897 142 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms