Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Gm11803-201ENSMUST00000119966 444 ntBASIC17.52■□□□□ 0.4
StrcQ8VIM6 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.52■□□□□ 0.4
StrcQ8VIM6 Gm45841-201ENSMUST00000207700 164 ntBASIC17.52■□□□□ 0.4
StrcQ8VIM6 CT485787.1-201ENSMUST00000225617 968 ntBASIC17.52■□□□□ 0.4
StrcQ8VIM6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
StrcQ8VIM6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
StrcQ8VIM6 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm27514-201ENSMUST00000183692 110 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Mir8109-201ENSMUST00000184375 117 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm19078-201ENSMUST00000206311 727 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm5425-201ENSMUST00000214125 459 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm17794-201ENSMUST00000220252 955 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Olfr582-201ENSMUST00000098212 960 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm15240-201ENSMUST00000118156 720 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm14723-201ENSMUST00000118686 215 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm13689-201ENSMUST00000119360 685 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.51■□□□□ 0.39
StrcQ8VIM6 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
StrcQ8VIM6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
StrcQ8VIM6 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.49■□□□□ 0.39
StrcQ8VIM6 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.49■□□□□ 0.39
StrcQ8VIM6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.49■□□□□ 0.39
StrcQ8VIM6 App-207ENSMUST00000227737 2827 ntBASIC17.49■□□□□ 0.39
StrcQ8VIM6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
StrcQ8VIM6 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms