Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rtn1Q8K0T0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Gm16198-201ENSMUST00000118766 670 ntBASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rtn1Q8K0T0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Gm16425-201ENSMUST00000118143 3130 ntBASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rtn1Q8K0T0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm15467-201ENSMUST00000120582 445 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm2272-201ENSMUST00000194903 582 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm43514-201ENSMUST00000198852 424 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm45747-201ENSMUST00000212203 999 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Rtn1Q8K0T0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rtn1Q8K0T0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rtn1Q8K0T0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms