Protein–RNA interactions for Protein: Q8CGP1

Hist1h2bk, Histone H2B type 1-K, mousemouse

Known RBP Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2bkQ8CGP1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm11927-201ENSMUST00000118472 759 ntBASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Mir7075-201ENSMUST00000184187 82 ntBASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hist1h2bkQ8CGP1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hist1h2bkQ8CGP1 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Paupar-201ENSMUST00000194826 3482 ntBASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm26833-201ENSMUST00000180899 440 ntBASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm8493-201ENSMUST00000196881 489 ntBASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hist1h2bkQ8CGP1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.29□□□□□ -0.6
Hist1h2bkQ8CGP1 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms