Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Gm9385-201ENSMUST00000117563 472 ntBASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Gm27301-201ENSMUST00000184012 127 ntBASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc60Q8C4J0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Gm10154-201ENSMUST00000084445 354 ntBASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc60Q8C4J0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc60Q8C4J0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm15593-201ENSMUST00000122085 1008 ntBASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm11594-201ENSMUST00000122313 162 ntBASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc60Q8C4J0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc60Q8C4J0 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ccdc60Q8C4J0 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms