Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Smco3Q8BQM7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Mir6404-201ENSMUST00000183699 94 ntBASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Smco3Q8BQM7 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.36□□□□□ -0.43
Smco3Q8BQM7 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Smco3Q8BQM7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm27389-201ENSMUST00000183622 195 ntBASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm37722-201ENSMUST00000193757 208 ntBASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Smco3Q8BQM7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms