Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.31□□□□□ -0.12
Vrk1Q80X41 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Gm5779-201ENSMUST00000218467 910 ntBASIC14.31□□□□□ -0.12
Vrk1Q80X41 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.31□□□□□ -0.12
Vrk1Q80X41 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Vrk1Q80X41 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm11543-201ENSMUST00000120758 370 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm16026-204ENSMUST00000162652 683 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm18737-201ENSMUST00000173594 937 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm27622-201ENSMUST00000183779 60 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Vrk1Q80X41 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Prob1-201ENSMUST00000097619 3021 ntBASIC14.29□□□□□ -0.12
Vrk1Q80X41 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.29□□□□□ -0.12
Vrk1Q80X41 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vrk1Q80X41 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vrk1Q80X41 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms