Protein–RNA interactions for Protein: Q3UHX8

Nkx6-3, Homeobox protein Nkx-6.3, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-3Q3UHX8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nkx6-3Q3UHX8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Nkx6-3Q3UHX8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Nkx6-3Q3UHX8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nkx6-3Q3UHX8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms