Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBXN1Q04323 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.65■□□□□ 0.74
UBXN1Q04323 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBXN1Q04323 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.65■□□□□ 0.74
UBXN1Q04323 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UBXN1Q04323 AC133963.1-201ENST00000504166 1679 ntBASIC19.65■□□□□ 0.74
UBXN1Q04323 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBXN1Q04323 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBXN1Q04323 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
UBXN1Q04323 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.74
UBXN1Q04323 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
UBXN1Q04323 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
UBXN1Q04323 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
UBXN1Q04323 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
UBXN1Q04323 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBXN1Q04323 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.64■□□□□ 0.73
UBXN1Q04323 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.64■□□□□ 0.73
UBXN1Q04323 TSPY15P-201ENST00000457163 923 ntBASIC19.64■□□□□ 0.73
UBXN1Q04323 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
UBXN1Q04323 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.64■□□□□ 0.73
UBXN1Q04323 MIR3917-201ENST00000580971 93 ntBASIC19.64■□□□□ 0.73
UBXN1Q04323 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.64■□□□□ 0.73
UBXN1Q04323 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.64■□□□□ 0.73
UBXN1Q04323 AC010947.1-201ENST00000623454 693 ntBASIC19.64■□□□□ 0.73
UBXN1Q04323 LINC00167-201ENST00000530583 1419 ntBASIC19.64■□□□□ 0.73
UBXN1Q04323 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
UBXN1Q04323 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.64■□□□□ 0.73
UBXN1Q04323 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
UBXN1Q04323 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.64■□□□□ 0.73
UBXN1Q04323 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBXN1Q04323 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
UBXN1Q04323 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.63■□□□□ 0.73
UBXN1Q04323 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 AC008687.5-201ENST00000593746 558 ntBASIC19.63■□□□□ 0.73
UBXN1Q04323 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 AC092865.7-201ENST00000641832 219 ntBASIC19.63■□□□□ 0.73
UBXN1Q04323 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBXN1Q04323 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
UBXN1Q04323 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBXN1Q04323 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.62■□□□□ 0.73
UBXN1Q04323 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.62■□□□□ 0.73
UBXN1Q04323 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.62■□□□□ 0.73
UBXN1Q04323 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.62■□□□□ 0.73
UBXN1Q04323 NAPSB-206ENST00000562112 1266 ntBASIC19.62■□□□□ 0.73
UBXN1Q04323 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.62■□□□□ 0.73
UBXN1Q04323 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
UBXN1Q04323 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBXN1Q04323 AP006294.2-201ENST00000641667 209 ntBASIC19.62■□□□□ 0.73
UBXN1Q04323 LINC00602-201ENST00000629776 2065 ntBASIC19.62■□□□□ 0.73
UBXN1Q04323 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
UBXN1Q04323 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.62■□□□□ 0.73
UBXN1Q04323 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBXN1Q04323 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms