Protein–RNA interactions for Protein: P62984

Uba52, Ubiquitin-60S ribosomal protein L40, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba52P62984 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Uba52P62984 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Uba52P62984 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Uba52P62984 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Uba52P62984 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Uba52P62984 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.03□□□□□ -0.32
Uba52P62984 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba52P62984 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Uba52P62984 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Uba52P62984 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Uba52P62984 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.03□□□□□ -0.32
Uba52P62984 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.03□□□□□ -0.32
Uba52P62984 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.03□□□□□ -0.32
Uba52P62984 Gm44454-201ENSMUST00000198541 138 ntBASIC13.03□□□□□ -0.32
Uba52P62984 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC13.03□□□□□ -0.32
Uba52P62984 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Gm6296-201ENSMUST00000222599 943 ntBASIC13.03□□□□□ -0.32
Uba52P62984 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Uba52P62984 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Uba52P62984 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Uba52P62984 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Uba52P62984 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Uba52P62984 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Uba52P62984 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Uba52P62984 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Uba52P62984 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Mir5131-201ENSMUST00000175426 93 ntBASIC13.02□□□□□ -0.33
Uba52P62984 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.02□□□□□ -0.33
Uba52P62984 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.02□□□□□ -0.33
Uba52P62984 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.02□□□□□ -0.33
Uba52P62984 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.02□□□□□ -0.33
Uba52P62984 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Uba52P62984 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Uba52P62984 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Uba52P62984 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.02□□□□□ -0.33
Uba52P62984 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Uba52P62984 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.02□□□□□ -0.33
Uba52P62984 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Uba52P62984 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Uba52P62984 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Uba52P62984 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Uba52P62984 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.01□□□□□ -0.33
Uba52P62984 Gm1401-201ENSMUST00000122048 772 ntBASIC13.01□□□□□ -0.33
Uba52P62984 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms