Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Vps4bP46467 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.2■□□□□ 0.02
Vps4bP46467 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Vps4bP46467 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
Vps4bP46467 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Vps4bP46467 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.19■□□□□ 0.02
Vps4bP46467 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Vps4bP46467 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.19■□□□□ 0.02
Vps4bP46467 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm13418-201ENSMUST00000119097 944 ntBASIC15.19■□□□□ 0.02
Vps4bP46467 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.19■□□□□ 0.02
Vps4bP46467 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.19■□□□□ 0.02
Vps4bP46467 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps4bP46467 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.19■□□□□ 0.02
Vps4bP46467 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.19■□□□□ 0.02
Vps4bP46467 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Vps4bP46467 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vps4bP46467 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Vps4bP46467 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Gm6089-201ENSMUST00000197666 938 ntBASIC15.18■□□□□ 0.02
Vps4bP46467 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps4bP46467 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.18■□□□□ 0.02
Vps4bP46467 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps4bP46467 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Vps4bP46467 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps4bP46467 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vps4bP46467 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.18■□□□□ 0.02
Vps4bP46467 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vps4bP46467 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.17■□□□□ 0.02
Vps4bP46467 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Vps4bP46467 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Vps4bP46467 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Vps4bP46467 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.17■□□□□ 0.02
Vps4bP46467 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Gm37153-201ENSMUST00000193637 231 ntBASIC15.17■□□□□ 0.02
Vps4bP46467 Gm43767-201ENSMUST00000198933 381 ntBASIC15.17■□□□□ 0.02
Vps4bP46467 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vps4bP46467 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vps4bP46467 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms